Culturable bacterial diversity from the chestnut (Castanea sativa Mill.) phyllosphere and antagonism against the fungi causing the chestnut blight and ink diseases.
Identifieur interne : 000A38 ( Main/Exploration ); précédent : 000A37; suivant : 000A39Culturable bacterial diversity from the chestnut (Castanea sativa Mill.) phyllosphere and antagonism against the fungi causing the chestnut blight and ink diseases.
Auteurs : Angel Valverde [Espagne, Afrique du Sud] ; María González-Tirante [Espagne] ; Marisol Medina-Sierra [Espagne, Colombie] ; Raúl Rivas [Espagne] ; Ignacio Santa-Regina [Espagne] ; José M. Igual [Espagne]Source :
- AIMS microbiology [ 2471-1888 ] ; 2017.
Abstract
The phyllosphere supports a large and complex bacterial community that varies both across plant species and geographical locations. Phyllosphere bacteria can have important effects on plant health. The sweet chestnut (Castanea sativa Mill.) is an economically important tree species affected worldwide by the fungal pathogens Cryphonectria parasitica and Phytophthora cinnamomi. We examined the culturable phyllosphere bacterial community of the sweet chestnut at two nearby locations in Central Spain in order to know its geographical variability and to explore its potential as source of biological control agents against these two pathogenic fungi. The bacterial diversity at strain level was high but it varied significantly between locations; however, phylotype richness and diversity were more comparable. The isolates were affiliated with the phyla Actinobacteria, Firmicutes and Proteobacteria. Most of them were members of recognized bacterial species, with a notable proportion of representative of the genera Dietzia and Lonsdalea, but a small fraction of the strains revealed the existence of several potential novel species or even genera. Antagonism tests showed the occurrence in the chestnut phyllosphere of bacterial strains potentially useful as biological control agents against the two pathogenic fungi, some of which belong to species never before described as fungal antagonists. Chestnut phyllosphere, therefore, contains a great diversity of culturable bacteria and may represent an untapped source of potential biocontrol agents against the fungi causing blight and ink diseases of this tree species.
DOI: 10.3934/microbiol.2017.2.293
PubMed: 31294162
PubMed Central: PMC6605015
Affiliations:
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Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca</wicri:regionArea><placeName><region nuts="2" type="communauté">Castille-et-León</region></placeName></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Genetics, Centre for Microbial Ecology and Genomics, University of Pretoria, Pretoria 0028, South Africa.</nlm:affiliation><country xml:lang="fr">Afrique du Sud</country><wicri:regionArea>Department of Genetics, Centre for Microbial Ecology and Genomics, University of Pretoria, Pretoria 0028</wicri:regionArea><wicri:noRegion>Pretoria 0028</wicri:noRegion></affiliation></author><author><name sortKey="Gonzalez Tirante, Maria" sort="Gonzalez Tirante, Maria" uniqKey="Gonzalez Tirante M" first="María" last="González-Tirante">María González-Tirante</name><affiliation wicri:level="2"><nlm:affiliation>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca</wicri:regionArea><placeName><region nuts="2" type="communauté">Castille-et-León</region></placeName></affiliation><affiliation wicri:level="2"><nlm:affiliation>Estación Biológica de Doñana, 41001 Sevilla, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Estación Biológica de Doñana, 41001 Sevilla</wicri:regionArea><placeName><region nuts="2" type="communauté">Andalousie</region></placeName></affiliation></author><author><name sortKey="Medina Sierra, Marisol" sort="Medina Sierra, Marisol" uniqKey="Medina Sierra M" first="Marisol" last="Medina-Sierra">Marisol Medina-Sierra</name><affiliation wicri:level="2"><nlm:affiliation>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca</wicri:regionArea><placeName><region nuts="2" type="communauté">Castille-et-León</region></placeName></affiliation><affiliation wicri:level="1"><nlm:affiliation>Escuela de Producción Agropecuaria, Group GRICA (Grupo de Investigación en Ciencias Agrarias), Facultad de Ciencias Agrarias, Universidad de Antioquia, Medellín, Colombia.</nlm:affiliation><country xml:lang="fr">Colombie</country><wicri:regionArea>Escuela de Producción Agropecuaria, Group GRICA (Grupo de Investigación en Ciencias Agrarias), Facultad de Ciencias Agrarias, Universidad de Antioquia, Medellín</wicri:regionArea><wicri:noRegion>Medellín</wicri:noRegion></affiliation></author><author><name sortKey="Rivas, Raul" sort="Rivas, Raul" uniqKey="Rivas R" first="Raúl" last="Rivas">Raúl Rivas</name><affiliation wicri:level="2"><nlm:affiliation>Departamento de Microbiología y Genética, Universidad de Salamanca, 37007 Salamanca, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Departamento de Microbiología y Genética, Universidad de Salamanca, 37007 Salamanca</wicri:regionArea><placeName><region nuts="2" type="communauté">Castille-et-León</region></placeName></affiliation><affiliation wicri:level="1"><nlm:affiliation>Unidad Asociada Universidad de Salamanca-CSIC (IRNASA), Salamanca, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Unidad Asociada Universidad de Salamanca-CSIC (IRNASA), Salamanca</wicri:regionArea><wicri:noRegion>Salamanca</wicri:noRegion></affiliation></author><author><name sortKey="Santa Regina, Ignacio" sort="Santa Regina, Ignacio" uniqKey="Santa Regina I" first="Ignacio" last="Santa-Regina">Ignacio Santa-Regina</name><affiliation wicri:level="2"><nlm:affiliation>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca</wicri:regionArea><placeName><region nuts="2" type="communauté">Castille-et-León</region></placeName></affiliation><affiliation wicri:level="1"><nlm:affiliation>Unidad Asociada Universidad de Salamanca-CSIC (IRNASA), Salamanca, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Unidad Asociada Universidad de Salamanca-CSIC (IRNASA), Salamanca</wicri:regionArea><wicri:noRegion>Salamanca</wicri:noRegion></affiliation></author><author><name sortKey="Igual, Jose M" sort="Igual, Jose M" uniqKey="Igual J" first="José M" last="Igual">José M. Igual</name><affiliation wicri:level="2"><nlm:affiliation>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca</wicri:regionArea><placeName><region nuts="2" type="communauté">Castille-et-León</region></placeName></affiliation><affiliation wicri:level="1"><nlm:affiliation>Unidad Asociada Universidad de Salamanca-CSIC (IRNASA), Salamanca, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Unidad Asociada Universidad de Salamanca-CSIC (IRNASA), Salamanca</wicri:regionArea><wicri:noRegion>Salamanca</wicri:noRegion></affiliation></author></analytic><series><title level="j">AIMS microbiology</title><idno type="eISSN">2471-1888</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The phyllosphere supports a large and complex bacterial community that varies both across plant species and geographical locations. Phyllosphere bacteria can have important effects on plant health. The sweet chestnut (<i>Castanea sativa</i> Mill.) is an economically important tree species affected worldwide by the fungal pathogens <i>Cryphonectria parasitica</i> and <i>Phytophthora cinnamomi</i>. We examined the culturable phyllosphere bacterial community of the sweet chestnut at two nearby locations in Central Spain in order to know its geographical variability and to explore its potential as source of biological control agents against these two pathogenic fungi. The bacterial diversity at strain level was high but it varied significantly between locations; however, phylotype richness and diversity were more comparable. The isolates were affiliated with the phyla <i>Actinobacteria</i>, <i>Firmicutes</i> and <i>Proteobacteria</i>. Most of them were members of recognized bacterial species, with a notable proportion of representative of the genera <i>Dietzia</i> and <i>Lonsdalea</i>, but a small fraction of the strains revealed the existence of several potential novel species or even genera. Antagonism tests showed the occurrence in the chestnut phyllosphere of bacterial strains potentially useful as biological control agents against the two pathogenic fungi, some of which belong to species never before described as fungal antagonists. Chestnut phyllosphere, therefore, contains a great diversity of culturable bacteria and may represent an untapped source of potential biocontrol agents against the fungi causing blight and ink diseases of this tree species.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">31294162</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">2471-1888</ISSN><JournalIssue CitedMedium="Internet"><Volume>3</Volume><Issue>2</Issue><PubDate><Year>2017</Year></PubDate></JournalIssue><Title>AIMS microbiology</Title><ISOAbbreviation>AIMS Microbiol</ISOAbbreviation></Journal><ArticleTitle>Culturable bacterial diversity from the chestnut (<i>Castanea sativa</i> Mill.) phyllosphere and antagonism against the fungi causing the chestnut blight and ink diseases.</ArticleTitle><Pagination><MedlinePgn>293-314</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3934/microbiol.2017.2.293</ELocationID><Abstract><AbstractText>The phyllosphere supports a large and complex bacterial community that varies both across plant species and geographical locations. Phyllosphere bacteria can have important effects on plant health. The sweet chestnut (<i>Castanea sativa</i> Mill.) is an economically important tree species affected worldwide by the fungal pathogens <i>Cryphonectria parasitica</i> and <i>Phytophthora cinnamomi</i>. We examined the culturable phyllosphere bacterial community of the sweet chestnut at two nearby locations in Central Spain in order to know its geographical variability and to explore its potential as source of biological control agents against these two pathogenic fungi. The bacterial diversity at strain level was high but it varied significantly between locations; however, phylotype richness and diversity were more comparable. The isolates were affiliated with the phyla <i>Actinobacteria</i>, <i>Firmicutes</i> and <i>Proteobacteria</i>. Most of them were members of recognized bacterial species, with a notable proportion of representative of the genera <i>Dietzia</i> and <i>Lonsdalea</i>, but a small fraction of the strains revealed the existence of several potential novel species or even genera. Antagonism tests showed the occurrence in the chestnut phyllosphere of bacterial strains potentially useful as biological control agents against the two pathogenic fungi, some of which belong to species never before described as fungal antagonists. Chestnut phyllosphere, therefore, contains a great diversity of culturable bacteria and may represent an untapped source of potential biocontrol agents against the fungi causing blight and ink diseases of this tree species.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Valverde</LastName><ForeName>Angel</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Genetics, Centre for Microbial Ecology and Genomics, University of Pretoria, Pretoria 0028, South Africa.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>González-Tirante</LastName><ForeName>María</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Estación Biológica de Doñana, 41001 Sevilla, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Medina-Sierra</LastName><ForeName>Marisol</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Escuela de Producción Agropecuaria, Group GRICA (Grupo de Investigación en Ciencias Agrarias), Facultad de Ciencias Agrarias, Universidad de Antioquia, Medellín, Colombia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rivas</LastName><ForeName>Raúl</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Departamento de Microbiología y Genética, Universidad de Salamanca, 37007 Salamanca, Spain.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Unidad Asociada Universidad de Salamanca-CSIC (IRNASA), Salamanca, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Santa-Regina</LastName><ForeName>Ignacio</ForeName><Initials>I</Initials><AffiliationInfo><Affiliation>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Unidad Asociada Universidad de Salamanca-CSIC (IRNASA), Salamanca, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Igual</LastName><ForeName>José M</ForeName><Initials>JM</Initials><AffiliationInfo><Affiliation>Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA), Consejo Superior de Investigaciones Científicas (CSIC), 37008 Salamanca, Spain.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Unidad Asociada Universidad de Salamanca-CSIC (IRNASA), Salamanca, Spain.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>05</Month><Day>03</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>AIMS Microbiol</MedlineTA><NlmUniqueID>101697141</NlmUniqueID><ISSNLinking>2471-1888</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Castanea sativa</Keyword><Keyword MajorTopicYN="N">Cryphonectria parasitica</Keyword><Keyword MajorTopicYN="N">Phytophthora cinnamomi</Keyword><Keyword MajorTopicYN="N">bacterial diversity</Keyword><Keyword MajorTopicYN="N">bacterial-fungal antagonism</Keyword><Keyword MajorTopicYN="N">phyllosphere</Keyword></KeywordList><CoiStatement>Conflict of Interest: All authors declare no conflicts of interest in this paper.</CoiStatement></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>03</Month><Day>01</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>04</Month><Day>21</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2019</Year><Month>7</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>5</Month><Day>3</Day><Hour>0</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>5</Month><Day>3</Day><Hour>0</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">31294162</ArticleId><ArticleId IdType="doi">10.3934/microbiol.2017.2.293</ArticleId><ArticleId IdType="pii">microbiol-03-02-293</ArticleId><ArticleId IdType="pmc">PMC6605015</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Appl Environ Microbiol. 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sort="Gonzalez Tirante, Maria" uniqKey="Gonzalez Tirante M" first="María" last="González-Tirante">María González-Tirante</name><name sortKey="Gonzalez Tirante, Maria" sort="Gonzalez Tirante, Maria" uniqKey="Gonzalez Tirante M" first="María" last="González-Tirante">María González-Tirante</name><name sortKey="Igual, Jose M" sort="Igual, Jose M" uniqKey="Igual J" first="José M" last="Igual">José M. 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Igual</name><name sortKey="Medina Sierra, Marisol" sort="Medina Sierra, Marisol" uniqKey="Medina Sierra M" first="Marisol" last="Medina-Sierra">Marisol Medina-Sierra</name><name sortKey="Rivas, Raul" sort="Rivas, Raul" uniqKey="Rivas R" first="Raúl" last="Rivas">Raúl Rivas</name><name sortKey="Rivas, Raul" sort="Rivas, Raul" uniqKey="Rivas R" first="Raúl" last="Rivas">Raúl Rivas</name><name sortKey="Santa Regina, Ignacio" sort="Santa Regina, Ignacio" uniqKey="Santa Regina I" first="Ignacio" last="Santa-Regina">Ignacio Santa-Regina</name><name sortKey="Santa Regina, Ignacio" sort="Santa Regina, Ignacio" uniqKey="Santa Regina I" first="Ignacio" last="Santa-Regina">Ignacio Santa-Regina</name></country><country name="Afrique du Sud"><noRegion><name sortKey="Valverde, Angel" sort="Valverde, Angel" uniqKey="Valverde A" first="Angel" last="Valverde">Angel Valverde</name></noRegion></country><country name="Colombie"><noRegion><name sortKey="Medina Sierra, Marisol" sort="Medina Sierra, Marisol" uniqKey="Medina Sierra M" first="Marisol" last="Medina-Sierra">Marisol Medina-Sierra</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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